High levels of diversity and population structure in the potato late blight pathogen at the Mexico centre of origin.
Identifieur interne : 000984 ( Main/Exploration ); précédent : 000983; suivant : 000985High levels of diversity and population structure in the potato late blight pathogen at the Mexico centre of origin.
Auteurs : Jianan Wang [États-Unis] ; Sylvia P. Fernández-Pavía [Mexique] ; Meredith M. Larsen [États-Unis] ; Edith Garay-Serrano [Mexique] ; Rosario Gregorio-Cipriano [Mexique] ; Gerardo Rodríguez-Alvarado [Mexique] ; Niklaus J. Grünwald [États-Unis] ; Erica M. Goss [États-Unis]Source :
- Molecular ecology [ 1365-294X ] ; 2017.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Phytophthora infestans.
- microbiologie : Maladies des plantes, Solanum tuberosum.
- Génétique des populations, Mexique.
English descriptors
- KwdEn :
- MESH :
- genetics : Phytophthora infestans.
- microbiology : Plant Diseases, Solanum tuberosum.
- Genetics, Population, Mexico.
Abstract
Globally destructive crop pathogens often emerge by migrating out of their native ranges. These pathogens are often diverse at their centre of origin and may exhibit adaptive variation in the invaded range via multiple introductions from different source populations. However, source populations are generally unidentified or poorly studied compared to invasive populations. Phytophthora infestans, the causal agent of late blight, is one of the most costly pathogens of potato and tomato worldwide. Mexico is the centre of origin and diversity of P. infestans and migration events out of Mexico have enormously impacted disease dynamics in North America and Europe. The debate over the origin of the pathogen, and population studies of P. infestans in Mexico, has focused on the Toluca Valley, whereas neighbouring regions have been little studied. We examined the population structure of P. infestans across central Mexico, including samples from Michoacán, Tlaxcala and Toluca. We found high levels of diversity consistent with sexual reproduction in Michoacán and Tlaxcala and population subdivision that was strongly associated with geographic region. We determined that population structure in central Mexico has contributed to diversity in introduced populations based on relatedness of U.S. clonal lineages to Mexican isolates from different regions. Our results suggest that P. infestans exists as a metapopulation in central Mexico, and this population structure could be contributing to the repeated re-emergence of P. infestans in the United States and elsewhere.
DOI: 10.1111/mec.14000
PubMed: 28035737
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Grünwald</name><affiliation wicri:level="1"><nlm:affiliation>Horticultural Crops Research Unit, USDA-ARS, Corvallis, OR, 97330, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Horticultural Crops Research Unit, USDA-ARS, Corvallis, OR, 97330</wicri:regionArea><wicri:noRegion>97330</wicri:noRegion></affiliation></author><author><name sortKey="Goss, Erica M" sort="Goss, Erica M" uniqKey="Goss E" first="Erica M" last="Goss">Erica M. Goss</name><affiliation wicri:level="1"><nlm:affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32611, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author></analytic><series><title level="j">Molecular ecology</title><idno type="eISSN">1365-294X</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Genetics, Population (MeSH)</term><term>Mexico (MeSH)</term><term>Phytophthora infestans (genetics)</term><term>Plant Diseases (microbiology)</term><term>Solanum tuberosum (microbiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Génétique des populations (MeSH)</term><term>Maladies des plantes (microbiologie)</term><term>Mexique (MeSH)</term><term>Phytophthora infestans (génétique)</term><term>Solanum tuberosum (microbiologie)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Phytophthora infestans</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Phytophthora infestans</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term><term>Solanum tuberosum</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term><term>Solanum tuberosum</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genetics, Population</term><term>Mexico</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Génétique des populations</term><term>Mexique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Globally destructive crop pathogens often emerge by migrating out of their native ranges. These pathogens are often diverse at their centre of origin and may exhibit adaptive variation in the invaded range via multiple introductions from different source populations. However, source populations are generally unidentified or poorly studied compared to invasive populations. Phytophthora infestans, the causal agent of late blight, is one of the most costly pathogens of potato and tomato worldwide. Mexico is the centre of origin and diversity of P. infestans and migration events out of Mexico have enormously impacted disease dynamics in North America and Europe. The debate over the origin of the pathogen, and population studies of P. infestans in Mexico, has focused on the Toluca Valley, whereas neighbouring regions have been little studied. We examined the population structure of P. infestans across central Mexico, including samples from Michoacán, Tlaxcala and Toluca. We found high levels of diversity consistent with sexual reproduction in Michoacán and Tlaxcala and population subdivision that was strongly associated with geographic region. We determined that population structure in central Mexico has contributed to diversity in introduced populations based on relatedness of U.S. clonal lineages to Mexican isolates from different regions. Our results suggest that P. infestans exists as a metapopulation in central Mexico, and this population structure could be contributing to the repeated re-emergence of P. infestans in the United States and elsewhere.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">28035737</PMID><DateCompleted><Year>2018</Year><Month>01</Month><Day>30</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1365-294X</ISSN><JournalIssue CitedMedium="Internet"><Volume>26</Volume><Issue>4</Issue><PubDate><Year>2017</Year><Month>Feb</Month></PubDate></JournalIssue><Title>Molecular ecology</Title><ISOAbbreviation>Mol Ecol</ISOAbbreviation></Journal><ArticleTitle>High levels of diversity and population structure in the potato late blight pathogen at the Mexico centre of origin.</ArticleTitle><Pagination><MedlinePgn>1091-1107</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/mec.14000</ELocationID><Abstract><AbstractText>Globally destructive crop pathogens often emerge by migrating out of their native ranges. These pathogens are often diverse at their centre of origin and may exhibit adaptive variation in the invaded range via multiple introductions from different source populations. However, source populations are generally unidentified or poorly studied compared to invasive populations. Phytophthora infestans, the causal agent of late blight, is one of the most costly pathogens of potato and tomato worldwide. Mexico is the centre of origin and diversity of P. infestans and migration events out of Mexico have enormously impacted disease dynamics in North America and Europe. The debate over the origin of the pathogen, and population studies of P. infestans in Mexico, has focused on the Toluca Valley, whereas neighbouring regions have been little studied. We examined the population structure of P. infestans across central Mexico, including samples from Michoacán, Tlaxcala and Toluca. We found high levels of diversity consistent with sexual reproduction in Michoacán and Tlaxcala and population subdivision that was strongly associated with geographic region. We determined that population structure in central Mexico has contributed to diversity in introduced populations based on relatedness of U.S. clonal lineages to Mexican isolates from different regions. Our results suggest that P. infestans exists as a metapopulation in central Mexico, and this population structure could be contributing to the repeated re-emergence of P. infestans in the United States and elsewhere.</AbstractText><CopyrightInformation>© 2016 John Wiley & Sons Ltd.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wang</LastName><ForeName>Jianan</ForeName><Initials>J</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-7704-666X</Identifier><AffiliationInfo><Affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32611, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernández-Pavía</LastName><ForeName>Sylvia P</ForeName><Initials>SP</Initials><AffiliationInfo><Affiliation>Laboratorio de Patología Vegetal, Universidad Michoacana de San Nicolás de Hidalgo, IIAF, Tarímbaro, Michoacán, 58880, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Larsen</LastName><ForeName>Meredith M</ForeName><Initials>MM</Initials><AffiliationInfo><Affiliation>Horticultural Crops Research Unit, USDA-ARS, Corvallis, OR, 97330, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Garay-Serrano</LastName><ForeName>Edith</ForeName><Initials>E</Initials><AffiliationInfo><Affiliation>Laboratorio de Patología Vegetal, Universidad Michoacana de San Nicolás de Hidalgo, IIAF, Tarímbaro, Michoacán, 58880, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gregorio-Cipriano</LastName><ForeName>Rosario</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Laboratorio de Patología Vegetal, Universidad Michoacana de San Nicolás de Hidalgo, IIAF, Tarímbaro, Michoacán, 58880, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rodríguez-Alvarado</LastName><ForeName>Gerardo</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Laboratorio de Patología Vegetal, Universidad Michoacana de San Nicolás de Hidalgo, IIAF, Tarímbaro, Michoacán, 58880, México.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grünwald</LastName><ForeName>Niklaus J</ForeName><Initials>NJ</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-1656-7602</Identifier><AffiliationInfo><Affiliation>Horticultural Crops Research Unit, USDA-ARS, Corvallis, OR, 97330, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Goss</LastName><ForeName>Erica M</ForeName><Initials>EM</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-3512-2107</Identifier><AffiliationInfo><Affiliation>Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32611, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>02</Month><Day>04</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mol Ecol</MedlineTA><NlmUniqueID>9214478</NlmUniqueID><ISSNLinking>0962-1083</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D005828" MajorTopicYN="Y">Genetics, Population</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D008800" MajorTopicYN="N">Mexico</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D055750" MajorTopicYN="N">Phytophthora infestans</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011198" MajorTopicYN="N">Solanum tuberosum</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Phytophthora infestans
</Keyword><Keyword MajorTopicYN="N">Oomycete</Keyword><Keyword MajorTopicYN="N">Toluca Valley</Keyword><Keyword MajorTopicYN="N">genetic variation</Keyword><Keyword MajorTopicYN="N">invasive pathogen</Keyword><Keyword MajorTopicYN="N">plant pathogen</Keyword><Keyword MajorTopicYN="N">population structure</Keyword><Keyword MajorTopicYN="N">potato</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>05</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2016</Year><Month>12</Month><Day>11</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>12</Month><Day>21</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2016</Year><Month>12</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>1</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2016</Year><Month>12</Month><Day>31</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28035737</ArticleId><ArticleId IdType="doi">10.1111/mec.14000</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Mexique</li><li>États-Unis</li></country></list><tree><country name="États-Unis"><noRegion><name sortKey="Wang, Jianan" sort="Wang, Jianan" uniqKey="Wang J" first="Jianan" last="Wang">Jianan Wang</name></noRegion><name sortKey="Goss, Erica M" sort="Goss, Erica M" uniqKey="Goss E" first="Erica M" last="Goss">Erica M. Goss</name><name sortKey="Grunwald, Niklaus J" sort="Grunwald, Niklaus J" uniqKey="Grunwald N" first="Niklaus J" last="Grünwald">Niklaus J. Grünwald</name><name sortKey="Larsen, Meredith M" sort="Larsen, Meredith M" uniqKey="Larsen M" first="Meredith M" last="Larsen">Meredith M. Larsen</name></country><country name="Mexique"><noRegion><name sortKey="Fernandez Pavia, Sylvia P" sort="Fernandez Pavia, Sylvia P" uniqKey="Fernandez Pavia S" first="Sylvia P" last="Fernández-Pavía">Sylvia P. Fernández-Pavía</name></noRegion><name sortKey="Garay Serrano, Edith" sort="Garay Serrano, Edith" uniqKey="Garay Serrano E" first="Edith" last="Garay-Serrano">Edith Garay-Serrano</name><name sortKey="Gregorio Cipriano, Rosario" sort="Gregorio Cipriano, Rosario" uniqKey="Gregorio Cipriano R" first="Rosario" last="Gregorio-Cipriano">Rosario Gregorio-Cipriano</name><name sortKey="Rodriguez Alvarado, Gerardo" sort="Rodriguez Alvarado, Gerardo" uniqKey="Rodriguez Alvarado G" first="Gerardo" last="Rodríguez-Alvarado">Gerardo Rodríguez-Alvarado</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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